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Workshop
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Sat 2:15
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Invited: Simulation Free Generative Models for Protein Structures, Single-Cell RNA, DNA sequences and Beyond!
Joey Bose
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Workshop
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Identifying Biological Priors and Structure in Single-Cell Foundation Models
Flavia Pedrocchi · Stefan Stark · Gunnar Ratsch · Amir Joudaki
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Workshop
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Robust Learning of Transfer Functions for Single-Cell Transcriptomics Depth Normalization
Da Kuang · Junhyong Kim
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Workshop
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Scalable unsupervised alignment of metric and nonmetric structures
Sanketh Vedula · Valentino Maiorca · Lorenzo Basile · Francesco Locatello · Alexander Bronstein
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Workshop
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Enhancing Single-Cell VAE Latent Space via Semi-Supervision
Meichen Gong · Konstantin Ivanov · Merja Heinäniemi · Ville Hautamäki
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Workshop
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Pre-training of Single-cell Language Models through Genetic Pathway Learning
Xuxi Chen · Zhangyang “Atlas” Wang · Marinka Zitnik · Manolis Kellis · Tianlong Chen
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Workshop
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scTree: Discovering Cellular Hierarchies in the Presence of Batch Effects in scRNA-seq Data
Moritz Vandenhirtz · Florian Barkmann · Laura Manduchi · Valentina Boeva · Julia Vogt
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Workshop
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scTree: Discovering Cellular Hierarchies in the Presence of Batch Effects in scRNA-seq Data
Moritz Vandenhirtz · Florian Barkmann · Laura Manduchi · Valentina Boeva · Julia Vogt
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Workshop
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Gene Regulatory Network Inference from Pre-trained Single-Cell Transcriptomics Transformer with Joint Graph Learning
Sindhura Kommu · Yizhi Wang · Yue Wang · Xuan Wang
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Workshop
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TarDis: Achieving Robust and Structured Disentanglement of Multiple Covariates
Kemal Inecik · Aleyna Kara · Antony Rose · Muzlifah Haniffa · Fabian Theis
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Workshop
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Geometry-Aware Autoencoders for Metric Learning and Generative Modeling on Data Manifolds
Xingzhi Sun · Danqi Liao · Kincaid Macdonald · Yanlei Zhang · Guillaume Huguet · Guy Wolf · Ian Adelstein · Tim G. J. Rudner · Smita Krishnaswamy
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Workshop
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Cross-modality Matching and Prediction of Perturbation Responses with Labeled Gromov-Wasserstein Optimal Transport
Jayoung Ryu · Romain Lopez · Charlotte Bunne · Luca Pinello · Aviv Regev
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